2024 The draft genome of sweet orange

The draft genome of sweet orange

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WebFeb 7, 2024 · Re-analysing sequences from ten cultivars of sweet orange 3 shows that they are all derived from the same genome by somatic mutations, and were thus not included … WebAug 5, 2014 · Thus, due to its economic and genetic importance, sweet orange is an important woody model plant. The draft genome of this species provides an …

Genomic investigation refutes record of most diverged avian …

Web(2013) Xu et al. Nature Genetics. Oranges are an important nutritional source for human health and have immense economic value. Here we present a comprehensive analysis of the draft genome of sweet orange (Citrus sinensis). The assembled sequence covers 87.3% of the estimated orange genome, which... WebHere we present a comprehensive analysis of the draft genome of sweet orange (Citrus sinensis). The assembled sequence covers 87.3% of the estimated orange genome, which … daniel esposito itzehoe

Somatic variations led to the selection of acidic and acidless orange …

WebAug 5, 2014 · Thus, due to its economic and genetic importance, sweet orange is an important woody model plant. The draft genome of this species provides an unprecedented opportunity to investigate its genetics, biochemistry, and evolution , and also provides a good opportunity to study protein-protein interactions in Citrus. WebAs we used the latest draft genome of sweet orange (Citrus sinensis v3.0), the method used was easier to understand, and the screening criteria were much more rigorous. Sweet oranges often grow in hilly and poorly established environments, though it does not contain many WRKY TFs, and we assume that the expression and transcriptional regulation ... WebFeb 1, 2024 · Due to the remarkable progress in genomics of citrus has been made, genome sequencing of 130 accession of various citrus species has been released including several key species such as Clementine... daniel e simmons ch nc

Genome-Wide Characterization and Expression Analysis of the

WebNov 25, 2012 · Here we present a comprehensive analysis of the draft genome of sweet orange (Citrus sinensis). The assembled sequence covers 87.3% of the estimated orange … WebAug 5, 2014 · Thus, due to its economic and genetic importance, sweet orange is an important woody model plant. The draft genome of this species provides an unprecedented opportunity to investigate its genetics, biochemistry, and evolution [ 30 ], and also provides a good opportunity to study protein-protein interactions in Citrus. daniel e. sicklesWebAs we used the latest draft genome of sweet orange (Citrus sinensis v3.0), the method used was easier to understand, and the screening criteria were much more rigorous. Sweet … marita grevelding

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The draft genome of sweet orange

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WebApr 7, 2014 · DNA sequencing confirmed that the CsPDS gene was mutated at the target site in treated sweet orange leaves. The mutation rate using the Cas9/sgRNA system was approximately 3.2 to 3.9%. Off-target mutagenesis was not detected for CsPDS -related DNA sequences in our study. WebIn this study, six GAPDH genes distributed across four chromosomes were identified within the sweet orange genome. Their gene structures, conserved subunits, and subcellular localization were also characterized.

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WebAug 18, 2024 · SBP-box is an important plant-specific transcription factor family and is involved in diverse biological processes. Here, we identified a total of 15 SBP-BOX genes in the important fruit crop sweet orange (Citrus sinensis) and characterized their gene structures, conserved domain and motif, chromosomal location, and cis-acting regulatory … WebHere we present a comprehensive analysis of the draft genome of sweet orange (Citrus sinensis). The assembled sequence covers 87.3% of the estimated orange genome, which …

WebNov 25, 2012 · Abstract. Oranges are an important nutritional source for human health and have immense economic value. Here we present a comprehensive analysis of the draft genome of sweet orange (Citrus sinensis). The assembled sequence covers 87.3% of the estimated orange genome, which is relatively compact, as 20% is composed of repetitive … WebApr 10, 2013 · Sweet orange's parents and mechanism for producing vitamin C revealed in its draft genome sequence by Agency for Science, Technology and Research (A*STAR), …

WebNov 3, 2024 · Here, we assembled a chromosome-level phased diploid Valencia sweet orange (DVS) genome with over 99.999% base accuracy and 99.2% gene annotation BUSCO completeness. DVS enables allele-level studies for sweet orange and other hybrids between pummelo and mandarin. WebJan 1, 2024 · In 2012, a draft assembly of the Valencia sweet orange genome was published (Xu et al., 2013). A dihaploid line derived from anther culture was sequenced using a WGS paired-end strategy with Illumina GAII (genome analyzer II) technology. ... The draft genome of sweet orange (Citrus sinensis. Nat. Genet., 45 (2013), pp. 59-66. CrossRef View in ...

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WebHere we present the draft genome of Pleurobrachia bachei, Pacific sea gooseberry, together with ten other ctenophore transcriptomes, and show that they are remarkably distinct from other animal ... daniel esposito columbiaWebNov 25, 2012 · This work sequenced the draft genome of a double-haploid sweet orange, constructed the Citrus sinensis annotation project (CAP) to store and visualize the … marita gronauWebNov 25, 2012 · Here we present a comprehensive analysis of the draft genome of sweet orange ( Citrus sinensis ). The assembled sequence covers 87.3% of the estimated orange genome, which is relatively... marita grunerWebNov 25, 2012 · Here we present a comprehensive analysis of the draft genome of sweet orange (Citrus sinensis). The assembled sequence covers 87.3% of the estimated orange … marita grisel cpaWebMar 31, 2024 · PDF RESUMEN El Centro Nacional para la Información Biotecnológica (NCBI) proporciona acceso a un conjunto de recursos computacionales que permiten el... Find, read and cite all the research ... daniel esposito oil equipment supplyWebJan 28, 2014 · Sweet orange accounts for more than half of the Citrus production both in fresh fruit and processed juice. We have sequenced the draft genome of a double-haploid … daniele stradi google scholarWebJun 6, 2013 · Recently, a draft reference genome sequence of sweet orange (C. sinensis cv. Valencia) was assembled de novo using the whole-genome DNA shotgun approach and long paired-end DNA sequencing (Xu et al., 2013). This high-quality reference genome allowed us to study DNA sequence polymorphisms at a genome-wide level by mapping potentially … marita hattem-schiffman